genewise output
Score 254.88 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000656_2.0    1 VEIGSLWREQAVVLFFLRRFGCQVCRWMAAEVSKLEKDLKAHGIALVGI 
                     VE+ SLW++Q VVLFFLRRFGCQ+CRWMA+E+SKLE DL+A G+ALVGI 
                     VELQSLWQDQPVVLFFLRRFGCQICRWMASEISKLEPDLRASGVALVGI 
OMLM01010914.1:-5560 ggcctctcgccggtttccatgtcatctagtgaaacgcgcagagggcgga 
                     tatactgaaacttttttggtggatgggtccatgatacatgcggtcttgt 
                     agcgtgggcgtgcgccgcatttgtcgggaagccaggatggcctaagggc 


SPP00000656_2.0   50 GPEETGVKEFKDGGFFKG                          IYIDE 
                     GPEE G+KEFK+GGFFKG                          +Y+DE 
                     GPEEVGLKEFKEGGFFKG          D:S[tct]        LYVDE 
OMLM01010914.1:-5413 gcggggcagtagggttagTGTTAGTA  Intron 1   TAGCTctggg 
                     gcaatgtaataaggttag <1-----[5358 : 4665]-1>  tataa 
                     acggtcgggcgaagttaa                          ttgta 


SPP00000656_2.0   74 MKQCYKDLGFK                          YNAINVVPAAMG 
                      K+CYKDLGFK                          Y A++VVPAA+G 
                     KKKCYKDLGFK           R:R[agg]       YTALSVVPAALG 
OMLM01010914.1:-4647 aaattagtgtaAGGTGAGTA  Intron 2   TAGGtagtaggcggcg 
                     aaagaaatgta  <2-----[4612 : 3917]-2> acctgttccctg 
                     agaccgtgcta                          cacatgtttggg 


SPP00000656_2.0   98 KKVREIASK                       ASAEGIQGNFSGDLLQS 
                     KKVR+IASK                       AS EGIQGNFSGDLLQS 
                     KKVRDIASK                       ASDEGIQGNFSGDLLQS 
OMLM01010914.1:-3879 aagcgagtaGTAGGTT  Intron 3   CAGgagggacgattggtcca 
                     aatgatcca<0-----[3852 : 3761]-0>cgaagtagatcgattag 
                     aaaatatag                       cctaacgcccaatgcgc 


SPP00000656_2.0  124 GGMLIVAK                          GEKVLLHFIQKSPAD 
                     GGMLIVAK                          GEKVLLHFIQ SP D 
                     GGMLIVAK          G:G[ggt]        GEKVLLHFIQDSPGD 
OMLM01010914.1:-3709 ggacaggaGGTAGAGT  Intron 4   AAGGTggagccctacgtcgg 
                     ggttttca <1-----[3684 : 2730]-1>  gaatttattaaccga 
                     acgccgca                          aaggtgcccgcatat 


SPP00000656_2.0  148 NPPLEEITKALGISANVQAGEKP                           
                       PLE I+ AL ISA V+AG+KP                           
                     LVPLENISSALDISAQVKAGQKP                           
OMLM01010914.1:-2682 cgccgaatagtgatgcgaggcac                           
                     ttctaatcgctatccatacgaac                           
                     tatgacacttgtcacacaaaaga                           


//
Making a S in phase 1 intron
Making a R in phase 2 intron
Making a G in phase 1 intron
>OMLM01010914.1:subseq(0,48816).pep
VELQSLWQDQPVVLFFLRRFGCQICRWMASEISKLEPDLRASGVALVGIGPEEVGLKEFK
EGGFFKGSLYVDEKKKCYKDLGFKRYTALSVVPAALGKKVRDIASKASDEGIQGNFSGDL
LQSGGMLIVAKGGEKVLLHFIQDSPGDLVPLENISSALDISAQVKAGQKP
//
>OMLM01010914.1:subseq(0,48816).[5560:2612].sp
GTAGAGCTCCAGTCTCTGTGGCAGGACCAGCCTGTGGTCTTGTTCTTCCTGCGCAGATTT
GGTTGTCAGATTTGCCGGTGGATGGCATCAGAGATCAGCAAACTGGAGCCAGATCTGAGG
GCCAGCGGTGTAGCACTGGTGGGGATCGGACCCGAGGAGGTTGGCCTGAAGGAGTTCAAG
GAAGGAGGGTTTTTTAAAGGATCTCTTTATGTGGATGAAAAAAAGAAATGCTACAAGGAT
TTGGGCTTTAAAAGGTACACAGCCTTAAGTGTGGTTCCTGCTGCGCTGGGGAAAAAAGTA
CGAGATATAGCTTCAAAGGCCAGCGATGAAGGAATCCAGGGCAACTTCTCAGGAGATTTG
CTCCAGAGCGGAGGCATGCTCATCGTGGCCAAAGGTGGAGAAAAGGTGCTTCTGCACTTC
ATCCAGGACTCACCTGGAGATCTTGTACCTCTGGAAAACATATCCAGTGCTTTGGATATC
TCAGCCCAAGTCAAAGCAGGACAAAAGCCA
//
OMLM01010914.1:subseq(0,48816)	GeneWise	match	5560	2614	254.88	-	.	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	cds	5560	5359	0.00	-	0	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	intron	5358	4665	0.00	-	.	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	cds	4664	4613	0.00	-	2	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	intron	4612	3917	0.00	-	.	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	cds	3916	3853	0.00	-	1	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	intron	3852	3761	0.00	-	.	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	cds	3760	3685	0.00	-	0	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	intron	3684	2730	0.00	-	.	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
OMLM01010914.1:subseq(0,48816)	GeneWise	cds	2729	2614	0.00	-	2	OMLM01010914.1:subseq(0,48816)-genewise-prediction-1
//